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上海市資源植物(wù)功能基因組學實驗室
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上海辰山植物(wù)科學研究中心
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科研成果

論文

  1. Zhao Q#, Yang J#, Cui M, Liu J, Fang Y, Yan M, Qiu W, Shang H, Xu Z, Yidiresi R, Weng J, Pluskal T, Vigouroux M, Steuernagel B, Wei Y, Yang L, Hu Y, Chen XY, Martin C*.. The reference genome sequence of Scutellaria baicalensis reveals how wogonin biosynthesis evolved. Molecular Plant. 2019, 12 (7): 935-950.  

  2. Yang J*, Wang Z*, Jiang Y* and Fei S*. Editorial: Genetics and Genomics of Polyploid Plants. Frontiers in Plant Science (2019)10: 934. 

  3. Wang H#, Wu Y#, Zhang Y, Yang J, Fan W, Zhang H, Zhao S, Yuan L*, Zhang P*. (2019) CRISPR/Cas9-Based Mutagenesis of Starch Biosynthetic Genes in Sweet Potato (Ipomoea batatas) for the Improvement of Starch Quality. International Journal of Molecular Sciences 20: 4702; doi:10.3390/ijms20194702. 

  4. Quispe-Huamanquispe DG, Gheysen G, Yang J, Jarret R, Rossel G, Kreuze JF. (2019) The horizontal gene transfer of Agrobacterium T-DNAs into the series Batatas (Genus Ipomoea) genome is not confined to hexaploid sweetpotato. Scientific Reports 9(1):12584. doi: 10.1038/s41598-019-48691-3. 

  5. Singh D, Sergeeva L, Ligterink W, Aloni R, Zemach H, Doron-faigenboim A,Yang J, Zhang P, Shabtai S, Firon N* (2019). Gibberellin Promotes Sweetpotato Root Vascular Lignification and Reduces Storage-root Formation. Frontiers in Plant Science doi: 10.3389/fpls.2019.01320. 

  6. Meiling Wang, Dongyong Yang, Feilong Ma, Mulan Zhu, Zhenying Shi*, Xuexia Miao*. OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genes. Rice. 2019,12: 9. /doi.org/10.1186/s12284-019-0267-0.

  7. Yuanyuan Cui, Yanwen Deng, Keyuan Zheng, Xiaomin Hu, Mulan Zhu, Xiaomei Deng*, Ruchun Xi*. An efficient micropropagation protocol for an endangered ornamental tree species (Magnolia sirindhorniae Noot. & Chalermglin)and assessment of genetic uniformity Through DNA markers. Scientific Reports,2019,9:9634.doi.org/10.1038/s41598-019-46050-w.

  8. Wu, S. and Tian, L. (2019) A new flavone glucoside together with known ellagitannins and flavones with anti-diabetic and anti-obesity activities from the flowers of pomegranate (Punica granatum). Natural Product Research 33: 252-257.

  9. Wilson, A.E., Wu, S. and Tian, L. (2019) PgUGT95B2 preferentially metabolizes flavones/flavonols and has evolved independently from flavone/flavonol UGTs identified in Arabidopsis thaliana. Phytochemistry 157: 184-193.

  10. Lijing Chang, Sheng Wu and Li Tian.(2019)Effective genome editing and identification of a regiospecific gallic acid 4-O-glycosyltransferase in pomegranate ( Punica granatum L.). Horticulture Research已接收

  11. Sheng Wu, Alexander E. Wilson Lijing Chang and Li Tian (2019)Exploring the Phytochemical Landscape of the Early-Diverging Flowering Plant Amborella trichopoda Baill. Molecules 已在線發表 

  12. Zujie Yao, Lina Sun, Yuqian Wang, Ling Lin, Zhuang Guo, Dong Li, Wenxiong Lin, Xiangmin Lin, Quantitative Proteomics Reveals Antibiotics Resistance Function of Outer Membrane Proteins in Aeromonas hydrophila, Frontiers in Cellular and Infection Microbiology, DOI: 10.3389/fcimb.2018.00390 RA118.001035

  13. Zujie Yao, Zhuang Guo, Yuqian Wang, Wanxin Li, Yuying Fu, Yuexu Lin,Wenxiong Lin and Xiangmin Lin, Integrated Succinylome Profiling and Metabolomics Reveal Crucial Role of S-ribosylhomocysteine lyase in Quorum Sensing and Metabolism of Aeromonas hydrophila. Molecular & Cellular Proteomics, 2019.mcp.RA118.001035 RA118.001035

  14. Xiaoxiao Zhang, Junhui Yuan*, Yonghong Hu*.New insights into Paeoniaceae used as medicinal plants in China. Scientific reports (accepted)

  15. Yan, M.X., Liu, R.B., Li, Y., Hipp, A.L., Deng, M., Xiong, Y.S. (in press)  Ancient events and climate adaptive capacity shaped distinct chloroplast genetic structure in the oak lineages. BMC Evolutionary Biology. (in press). MS ID: 12862_2019_1523

  16. Yu, Shuo, Miaomiao Shi and Kai Jiang* (2019). Chloroplast genome structure and phylogenetic position of Ruppia sinensis Shuo Yu & den Hartog. Mitochondrial DNA Part B 4(2): 2916-2917.

  17. Xu, Na-na, Kai. Jiang, S. R. Biswas, Xin Tong, Rong Wang and Xiao Yong Chen* (2019). Clone configuration and spatial genetic structure of two Halophila ovalis populations with contrasting internode lengths. Frontiers in Ecology and Evolution 7(May): 1-13.

  18. Xiao, Yue-E., Dongmei. Jin, Kai. Jiang, Yonghong Hu, Xin Tong, S. J. Mazer and Xiaoyong Chen* (2019). Plant Ecology & Diversity Pollinator limitation causes sexual reproductive failure in ex situ populations of self-compatible Iris ensata. Plant Ecology & Diversity 00(00): 1-15.

  19. Miao, Liyuan, Chao Hu, Weichang Huang and Kai Jiang* (2019). Chloroplast genome structure and phylogenetic position of Calanthe sylvatica (Thou.) Lindl. (Orchidaceae). Mitochondrial DNA Part B 4(2): 2625-2626.

  20. Jiang,Kai*, Zhengwei Wang, Weichang Huang and Yonghomg Hu (2019). Characterization of two complete chloroplast genomes of Lindera megaphylla (Lauraceae).Mitochondrial DNA Part B 4(2): 2851-2852.

  21. Daike Tian, Chun Li, Xun-Lin Yu, Jian-Lin Zhou, Ke-Min Liu, Jiang-Ping Shu, Xi-Le Zhou, Yan Xian. A new tuberous species endemic to Danxia landforms in central China. Phytotaxa, 2019, 407(1):101-110.

  22. Yi Tong, Dai-Ke Tian*, Jiang-Ping Shu, Yan Xiao, Bing-Mou Wang, Nai-Feng Fu. Begonia yizhouensis, a new species in Begonia sect. Coelocentrum (Begoniaceae) from Guangxi, China. Phytotaxa, 2019, 407(1):059-070.

  23. Dasheng Zhang, Qing Chen, Qingqing Liu, Fengluan Liu, Lijie Cui, Wen Shao, Shaohua Wu, Jie Xu and Daike Tian*, Histological and Cytological Characterization of Anther and Appendage Development in Asian Lotus (Nelumbo nucifera Gaertn.), Inernational Journal of Molecular Science, 2019, 20(5), 1015; doi: 10.3390/ijms20051015.

  24. Qingqing Liu, Dasheng Zhang, Fengluan Liu, Mi Qin, Daike Tian*. Micropropagation of lotus (Nelumbo) through germfree mature embryos. In Vitro Cellular & Developmental Biology – Plant, 2019. 55: 305-312.

  25. Wang W, Singh SK, Li X, Sun H, Yang Y, Jiang M, Zi H, Liu R, Zhang H, Chu Z.Partial defoliation of Brachypodium distachyon plants grown in petri dishes under low light increases P and other nutrient levels concomitantly with transcriptional changes in the roots. PeerJ. 2019 Jun 13;7:e7102. doi: 10.7717/peerj.7102. eCollection 2019.PMID: 31223535 Free PMC Article

  26. .Niu C, Jiang M, Li N, Cao J, Hou M, Ni DA, Chu Z.Integrated bioinformatics analysis of As, Au, Cd, Pb and Cu heavy metal responsive marker genes through Arabidopsis thaliana GEO datasets. PeerJ. 2019 Mar 18;7:e6495. doi: 10.7717/peerj.6495. eCollection 2019.PMID: 30918749 Free PMC Article

  27. Yang Y, Tang K, Datsenka TU, Liu W, Lv S, Lang Z, Wang X, Gao J, Wang W, Nie W, Chu Z, Zhang H, Handa AK, Zhu JK, Zhang H.Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome.J Integr Plant Biol. 2019 Jan 16. doi: 10.1111/jipb.12778. [Epub ahead of print] PMID: 30652405

  28. Yu Lan-lan, Song Chang-mei, Sun Lin-jing, Li Li-li, Xu Zhi-gang, Tang* Can-ming. Effects of light-emitting diodes on tissue culture plantlets and seedlings of rice. Jour of Integrative Agriculture.2019.18(0):2-13.

  29. Jing-Jing Xu, Xin Fang, Chen-Yi Li, Lei Yang, Xiao-Ya Chen*. General and specialized tyrosine metabolism pathway in plants. aBIOTECH. 2019. DOI: 10.1007/s42994-019-00006-w.

  30. Jin-Quan Huang, Xin Fang, Xiu Tian, Ping Chen, Jia-Ling Lin, Xiao-Xiang Guo, Jian-Xu Li, Zhen Fan, Wei-Meng Song, Fang-Yan Chen, Ruzha Ahati, Ling-Jian Wang, Qing Zhao, Cathie Martin, Xiao-Ya Chen*. Aromatization of natural products by a specialized detoxification enzyme. Nature Chemical Biology, 2019. Accepted.

  31. Jianhua Li, Kaibo Wang, Ishmael Mutanda, Lei Yang, Jiawei Wang, Yong Wang*. Chloroplastic metabolic engineering coupled with isoprenoid pool enhancement for committed taxol intermediates biosynthesis in Nicotiana benthamiana. Nature Communications, 2019. Accepted.

  32. Chao Niu#, Min Jiang#, Na Li,Jianguo Cao, Meifang Hou, Di-an Ni, Zhaoqing Chu*.Integrated bioinformatics analysis of As, Au, Cd, Pb and Cu heavy metal responsive marker genes through Arabidopsis thaliana GEO datasets. PeerJ. 2019. 7:e6495.

  33. Wei Wang#, Sunil Kumar Singh#, Xinwen Li, Hui Sun, Yu Yang, Min Jiang, Hailing Zi, Renyi Liu, Huiming Zhang, Zhaoqing Chu*. Partial defoliation of Brachypodium distachyon plants grown in petri dishes under low light increases P and other nutrient levels concomitantly with transcriptional changes in the roots. PeerJ. 2019. 7:e7102.

  34. Yu Yang#, Kai Tang#, Tatsiana U Datsenka#, Wenshan Liu, Suhui Lv, Zhaobo Lang, Xingang Wang, Jinghui Gao, Wei Wang, Wenfeng Nie, Zhaoqing Chu, Heng Zhang, Avtar K Handa, Jiankang Zhu, Huiming Zhang*. Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome. J Integr Plant Biol. 2019.

  35. Yu Lan-lan, Song Chang-mei, Sun Lin-jing, Li Li-li, Xu Zhi-gang, Tang* Can-ming. Effects of light-emitting diodes on tissue culture plantlets and seedlings of rice. Jour of Integrative Agriculture.2019.

  36. Xi-Ling Dai, Jia-Qian Bao, Quan-Xi Wang, Yu-Chen Cao, and Jian-Guo Cao*. Ultrastructural Studies of Oogenesis in the Fern Diplopterygium glaucum. American Fern Journal,2019, 109(1), 1-10. 

  37. Xinxin Zhang, Xin Wang, Minglong Wang, Jianguo Cao, Jianbo Xiao,Quanxi Wang. Effects of different pretreatments on flavonoids and antioxidant activity of Dryopteris erythrosora leave. PLOS ONE https://doi.org/10.1371/journal.pone.0200174 January 2, 2019.

  38. Jiejie Song, Hongmei Luo, Zhichao Xu, Yuxi Zhang, Hua Xin, Dan Zhu, Xunzhi Zhu, Mengmeng Liu, Weiqing Wang, Hongwei Ren, Hongyu Chen1, Ting Gao*. Mining Genes Associated with Furanocoumarin Biosynthesis in an Endangered Medicinal Plant Glehnia littoralis. Journal of Genetics. 2019.Accepted.

  39. Ting Gao, ZhichaoXu, Xiaojun Song, et al. Hybrid Sequencing of Full-Length cDNA Transcripts of the Medicinal Plant Scutellaria baicalensis. Int. J. Mol. Sci. 2019, 20, 4426. doi:10.3390/ijms20184426.

  40. Xinlian Chen, Yingxian Cui , Liping Nie , Haoyu Hu , Zhichao Xu ,Wei Sun ,Ting Gao , Jingyuan Song , and Hui Yao. Identification and Phylogenetic Analysis of the Complete Chloroplast Genomes of Three Ephedra Herbs Containing Ephedrine. BioMed Research International.2019, Article ID 5921725, 10. https://doi.org/10.1155/2019/5921725

  41. Juan Du, Miaoxue Qiu, Lizhong Guo, et al. Computational study of the binding mechanism between farnesoid X receptor α and antagonist N-benzyl-N-(3-(tertbutyl)-4-hydroxyphenyl)-2,6-dichloro-4-(dimethylamino) benzamide. J Biomol Struct Dyn, 2018. https://doi.org/10.1080/07391102. 2018. 1462735

  42. Yong-Hui Jin, Jun-Jie Wu, Yong-Qing Peng, Shu-Hang Hu, Hai-Shan Yan, Fan Xiao, Xuan Zhou, Jing Gao, Rui-Hong Wang, Ling Xu & Zhe-Chen Qi. The complete mitochondrial genome of heartbreak grass Gelsemium elegans (Gardner & Champ.) Benth. (Gelsemiaceae). Mitochondrial DNA Part B-Resources 2019/10/23 4(2) 3721–3722.

  43. Zhi-Cheng Zhang, Shu-Hang Hu, Yong-Qing Peng, Hai-Shan Yan, Fan Xiao, Jing Gao, Jun-Jie Wu, Xuan Zhou, Xin-Yan Xu, Ling Xu, Rui-Hong Wang & ZheChen Qi. The complete chloroplast genome of Mexican marigold (Tagetes erecta L., Asteraceae). Mitochondrial DNA Part B-Resources 2019/10/15 4(2) 3587–3588.

  44. Ying-Xi Qian, Jing Gao, Yong-Hui Jin, Rui-Hong Wang, Ling Xu & Zhe-Chen Qi. The complete chloroplast genome sequence of plumed cockscomb (Celosia argentea,Amaranthaceae). Mitochondrial DNA Part B-Resources 2019/7/10 4(2) 2123–2124

  45. 張紫娟,侯雷平*,薛紅衛,許智宏,朱木(mù)蘭*.馬鈴薯不同起始外植體不定根快(kuài)速誘導體系的(de)建立. 山西農業科學,2019,47(01):1-5.

  46. 朱嬌,黃(huáng)衛昌*.小白及光(guāng)合特性及其相關因子關系. 中國農學通(tōng)報,2019,55(2):209-217.

  47. 朱嬌,黃(huáng)衛昌*,曹建國,周翔宇. 上海适生白及屬植物(wù)的(de)耐濕性評價及其生理(lǐ)機制研究. 植物(wù)生理(lǐ)學報, 2019, 55(2): 209-217.

  48. 田代科. 荷花新品種培育、命名登陸與資源保護. 花卉園藝, 2019:13-15.

  49. 田代科. 荷花研究和(hé)産業發展要與時(shí)俱進.安徽園林(lín), 2019, 69(2):19.

  50. 田代科, 陳煜初, Hoang Thi Nga. 基于實地考察了(le)解越南(nán)的(de)荷花資源、研究及産業現狀. 長(cháng)江蔬菜, 2019.6 (40-45)

  51. 劉鳳栾, 田代科*. 觀賞荷花新品種‘大(dà)黃(huáng)蜂’. 園藝學報,2019(S2).

  52. 闵睫, 劉鳳栾, 田代科*, 向言詞. 荷花切花品種的(de)綜合評價及良種篩選. 南(nán)方農業學報, 2019, 50(8):1792-1800.

  53. 肖豔, 田代科, 向楚華, 向祖恒, 張曉春, 向華, 張成, 陳功錫. 湖南(nán)烏龍山國家地質公園的(de)種子植物(wù)多(duō)樣性及特點. 植物(wù)學研究, 2019, 8(3): 324-342.

  54. 劉麗,李雁瓷,闵睫,向言詞,田代科*. 世界荷花品種資源統計及特征分(fēn)析. 農業科學, 2019, 9(3), 163-181.

  55. 朱木(mù)蘭, 鄭珂媛. 沒有種子,何來(lái)種苗. 創新徐彙, 2019-05-24.

  56. 汪成忠,倪雪(xuě)豔,馬菡澤,錢劍林(lín),楊繼,胡永紅,宋志平. ‘鳳丹’牡丹不同器官C、N、P和(hé)可(kě)溶性糖的(de)季節性變化(huà)特征.林(lín)業科學,2019,12.

  57. 陳泓宇,任宏偉,張玉喜,王衛青,譚玲玲, 高(gāo)婷*北(běi)沙參異戊烯基轉移酶GlIPT基因的(de)克隆及生物(wù)信息學分(fēn)析.中草(cǎo)藥,2019.已接收.

專利

專利名稱

類别

完成人(rén)

是否

授權

授權時(shí)間

申請/授權号

一種利用(yòng)酵母快(kuài)速篩選植物(wù)多(duō)重逆境抗性基因的(de)方法

發明(míng)

儲昭慶、李鵬

2019.9.3

CN 103509876 B

201310509029.8

一種适合于二穗短柄草(cǎo)外源基因檢測及拷貝數分(fēn)析的(de)内标準基因及其應用(yòng)

發明(míng)

儲昭慶、朱宏

2019.9.3

CN 103525922 B

一種瓦氏秋海棠的(de)離體再生方法

發明(míng)

田代科、張大(dà)生、陳青、趙喜雙、付乃峰、劉青青、陳蒙嬌,吳少華

2019.4.9

ZL201610824265.2

一種将外源基因轉化(huà)到荷花中進行瞬間表達的(de)方法

發明(míng)

田代科,張大(dà)生,陳青,劉青青,劉鳳栾,趙喜雙,吳璇,陳蒙嬌,吳少華

2019.9.10

ZL201610824255.9

一種高(gāo)架橋下(xià)的(de)立體綠化(huà)裝置

實用(yòng)新型

邢強,秦俊,胡永紅

2019.1


一種戶外劇場(chǎng)

實用(yòng)新型

邢強,秦俊,胡永紅

2019.1


一種采用(yòng)花序浸染快(kuài)速高(gāo)效遺傳轉化(huà)二穗短柄草(cǎo)的(de)方法

發明(míng)

儲昭慶、李鵬


201910927285.6

一種睡(shuì)蓮無菌材料的(de)制備方法

發明(míng)

朱木(mù)蘭,吉琴,楊寬,鄭珂媛


201911122367.X

一種落葉松針葉高(gāo)效離體再生方法

發明(míng)

朱木(mù)蘭,鄭珂媛,王可(kě)佳,闫學彤


201910907338.8

黃(huáng)芩黃(huáng)酮苯丙素和(hé)類黃(huáng)酮O-甲基轉移酶基因及其載體構建和(hé)應用(yòng)

發明(míng)

趙清,崔孟穎,柳潔,方譽民,Cathie Martin


201910330809.3

黃(huáng)芩中花青素轉錄調控因子S比MYB75和(hé)SBDEL的(de)基因克隆載體構建及其應用(yòng)

發明(míng)

趙清,柳潔,崔孟穎,方譽民,Cathie Martin


201910330805.5

 


專著

  1. 葉康、秦俊、胡永紅.2019. 建築立面綠化(huà)植物(wù). 北(běi)京:中國建築出版社.

  2. 邢強,秦俊, 胡永紅. 2019.可(kě)持續草(cǎo)坪綠化(huà)技術. 北(běi)京:中國建築出版社.

  3. DAI-KE TIAN, YU-MIN SHUI, MARK HUGHES, RUTH KIEW, MARK TEBBITT & PETER W. MOONLIGHT (Editors). Phytotaxa Begonia Special Issue: Part II. Magnolia Press, Auckland, New Zealand. 2019

 


新品種

  1. 選育荷花優良單株11個(gè),完成國際登錄5個(gè)

 

 

獲獎

  1. 2019上海科技節先進集體獎

  2. “香石竹、百合、菊花種質創新與産業化(huà)關鍵技術集成與應用(yòng)”項目獲得(de)上海市科技進步二等獎。(朱木(mù)蘭)

  3. 中國科學院青年創新促進會會員(yuán)(趙清)

  4. 中國植物(wù)生理(lǐ)與分(fēn)子生物(wù)學學會青年優秀論文獎(趙清)

  5. 入選中國植物(wù)生理(lǐ)與分(fēn)子生物(wù)學學會代謝專委會委員(yuán)(趙清)

  6. 獲“賽諾菲—中國科學院上海生命科學研究院優秀青年人(rén)才獎” (趙清)