研究隊伍

旋花科進化(huà)研究組

> 課題組長(cháng)

組　　長(cháng)：楊俊，博士，洪堡學者，研究員(yuán)
通(tōng)訊地址：上海市松江區(qū)辰花路3888号上海辰山植物園科研中心（201602）
聯系電話(huà)：021-57799381

郵　　箱：yangjun@csnbgsh.cn

楊俊，男(nán)，博士，洪堡學者，研究員(yuán)。長(cháng)期從事甘薯遺傳轉化(huà)、基因組研究分(fēn)析工作，聚焦于解析甘薯塊根膨大(dà)機制、六倍體甘薯基因組組成和(hé)起源等，主要研究成果發表在Nature Plants，Molecular Plant，Nature Communications，Plant Science等國際著名學術期刊上，并應Frontiers in Plant Science雜(zá)志邀請作爲客座副主編組織Genetics and Genomics of Polyploid Plants研究專題。楊俊帶領團隊在甘薯遺傳學領域做(zuò)出的(de)開創性工作極大(dà)地推動了(le)我國甘薯主産區(qū)的(de)産業良性高(gāo)速發展，獲得(de)了(le)各級各部門獎勵十餘項，其中包括泰安市科學技術進步一等獎（2012）、山東省農業科學院科技開發成果獎（2013）、山東省科學技術進步三等獎（2019）和(hé)上海市青年拔尖人(rén)才（2020）等。

青年課題組長(cháng): 王紅霞, 副研究員(yuán)

聯系電話(huà)：021-37792288-903

郵箱：E-mail: hxwang@cemps.ac.cn

王紅霞，博士，副研究員(yuán)，2007年河(hé)南(nán)大(dà)學碩士畢業，導師宋純鵬教授。2014年獲得(de)中科院大(dà)學博士學位。先後獲得(de)中科院和(hé)國家基金委項目支持去英國John Innes Centre 和(hé)美(měi)國肯塔基大(dà)學訪學。主持國家自然科學基金青年項目、面上項目及重點研發專項等項目。主要開展甘薯次生代謝物(wù)如花青素的(de)功能及修飾、白藜蘆醇等研究，并延伸到甘薯儲藏根發育、澱粉合成等研究，建立次生代謝物(wù)與儲藏根發育的(de)聯系。首次在甘薯中運用(yòng)基因編輯技術改良了(le)澱粉的(de)品質，從而加速了(le)甘薯的(de)定向育種。科研成果發表在Journal of Experimental Botany, Horticulture Research等雜(zá)志。獲得(de)泰安市科技進步二等獎，授權發明(míng)專利2項。

> 研究領域

旋花科進化(huà)研究組重點關注旋花科植物(wù)間的(de)進化(huà)關系，采用(yòng)比較基因組學爲主，代謝組學爲輔的(de)研究手段。目前主要研究内容爲：I. trifida，I. triloba，I. batatas和(hé)I. nil基因組的(de)深度注釋；菟絲子和(hé)牽牛花的(de)比較基因組學研究和(hé)次生代謝産物(wù)分(fēn)析。

> 重要成果

1. Fan WJ#, Zhang YD, Wu YL, Zhou WZ, Yang J, Yuan L, Zhang P*, Wang HX* (2021). The H+-pyrophosphatase IbVP1 regulates carbon flux to influence starch metabolism and yield in sweet potato. Horticulture Research, 8: 20.

2. Pei Tianlin#, Yan Mengxiao#, Kong Yu, Liu Jie, Cui Mengying, Fang Yuming, Ge Binjie, Yang Jun*, Zhao Qing*. (2021). The genome of Tripterygium wilfordii and characterization of the celastrol biosynthesis pathway. Gigabyte, 1-32.

3. Chen M#, Fan W#, Ji F#, Hua H, Liu J, Yan M, Ma Q, Fan J, Wang Q, Zhang S, Liu G, Sun Z, Tian C, Zhao F, Zheng J, Zhang Q, Chen J, Qiu J, Wei X, Zhang P*, Pei D*, Yang J*, Huang X*. (2020) Genome-wide identification of agronomically important genes in outcrossing crops using OutcrossSeq. Molecular Plant (Accepted).

4. Eserman LA, Sosef MSM, Simão-Bianchini R, Utteridge TMA, Barbosa JCJ, Buril MT, Chatrou LW, Clay K, Delgado G, Desquilbet TE, Ferreira PPA, Allende JRG, Hernández AL, Huerta-Ramos G, Jarret RL, Kojima RK, Landrein S, Lourenço JAAM, Man ID, Miller RE, More S, Moreira ALC, Mwanga-Mwanga I, Nhanala S, Pastore M, Petrongari FS, Pisuttimarn P, Pornpongrungrueng P, Rifkin J, Santos FDS, Shimpale VB, Silva SS, Stinchcombe JR, Traiperm P, Vasconcelos LV, Wang ML, Villordon A, Yang J, Yencho GC, Heider B, Simões ARG. (2786) Proposal to change the conserved type of Ipomoea, nom. cons. (Convolvulaceae). Taxon. (2020), 69 (6): 1369-1371.

5. Pei Tianlin#, Yan Mengxiao#, Kong Yu, Liu Jie, Cui Mengying, Fang Yuming, Ge Binjie, Yang Jun*, Zhao Qing*. (2020). The genome analysis of Tripterygium wilfordii reveals TwCYP712K1 and TwCYP712K2 responsible for oxidation of friedelin in celastrol biosynthesis pathway. bioRxiv, doi: 10.1101/2020.06.29.176958.

6. Moeinzadeh M#*, Yang J#, Muzychenko E, Gallone G, Heller D, Reinert K, Haas S, Vingron M. (2020) Ranbow: A fast and accurate method for polyploid haplotype reconstruction. PLOS Computational Biology. doi: 10.1371/journal.pcbi.1007843.

7. Li X, Wang P, Li J, Wei S, Yan Y, Yang J, Zhao M, Langdale JA, Zhou W. (2020) Maize GOLDEN2-LIKE genes enhance biomass and grain yields in rice by improving photosynthesis and reducing photoinhibition. Communications Biology 3(1):151. doi: 10.1038/s42003-020-0887-3.

8. Yang J*, Wang Z*, Jiang Y* and Fei S*. (2019) Editorial: Genetics and Genomics of Polyploid Plants. Frontiers in Plant Science 10: 934.

9. Zhao Q#, Yang J#, Cui M, Liu J, Fang Y, Yan M, Qiu W, Shang H, Xu Z, Yidiresi R, Weng J, Pluskal T, Vigouroux M, Steuernagel B, Wei Y, Yang L, Hu Y, Chen XY, Martin C. (2019) The Reference Genome Sequence of Scutellaria baicalensis Provides Insights into the Evolution of Wogonin Biosynthesis. Molecular Plant 12(7):935-950.

10. Wang H#, Wu Y#, Zhang Y, Yang J, Fan W, Zhang H, Zhao S, Yuan L*, Zhang P*. (2019) CRISPR/Cas9-Based Mutagenesis of Starch Biosynthetic Genes in Sweet Potato (Ipomoea batatas) for the Improvement of Starch Quality. International Journal of Molecular Sciences 20(19): 4702.

11. Quispe-Huamanquispe DG, Gheysen G, Yang J, Jarret R, Rossel G, Kreuze JF. (2019) The horizontal gene transfer of Agrobacterium T-DNAs into the series Batatas (Genus Ipomoea) genome is not confined to hexaploid sweetpotato. Scientific Reports 9(1):12584. doi: 10.1038/s41598-019-48691-3.

12. Singh D, Sergeeva L, Ligterink W, Aloni R, Zemach H, Doron-faigenboim A,Yang J, Zhang P, Shabtai S, Firon N* (2019). Gibberellin Promotes Sweetpotato Root Vascular Lignification and Reduces Storage-root Formation. Frontiers in Plant Science doi: 10.3389/fpls.2019.01320

13. Yang J*, and Huang X*. (2018) A new high-quality genome sequence in soybean. Science China Life Sciences 61:1-2.

14. Zhao Q#, Yang J#, Liu J, Cui M, Fang Y, Qiu W, Shang H, Xu Z, Wei Y, Yang L, Hu Y, Chen XY, Martin C. (2018) A draft reference genome sequence for Scutellaria baicalensis Georgi. bioRxiv, 398032.

15. Wang H*, Wang C, Fan W, Yang J, Appelhagen I, Wu Y, Zhang P* (2018) A novel glycosyltransferase catalyses the transfer of glucose to glucosylated anthocyanins in purple sweet potato. Journal of Experimental Botany 69(22):5444-5459.

16. Yang J#, Moeinzadeh M#, Kuhl H, Helmuthj, Xiao P, Haas S, Liu G, Zheng J, Sun Z, Fan W, Deng G, Wang H, Hu F, Zhao S, Fernie AR, Boerno S, Timmermann B, Zhang P* & Vingron M*. (2017) Haplotype-resolved sweet potato genome traces back its hexaploidization history. Nature Plants 3: 696–703.

17. An D, Ma Q, Wang H, Yang J, Zhou W, Zhang P (2017) Cassava C-repeat binding factor 1 gene responds to low temperature and enhances cold tolerance when overexpressed in Arabidopsis and cassava. Plant Molecular Biology 94(1-2):109-124.

18. Fan WJ, Wang HX, Wu YL, Yang N, Yang J, Zhang P (2017) H+-pyrophosphatase IbVP1 promotes efficient iron use in sweet potato [Ipomoea batatas (L.) Lam.]. Plant Biotechnology Journal. 15: 698-712.

19. 胡永紅, 楊舒婷, 楊俊, 萬吉爾, 陳曉亞. (2017) 植物(wù)園支持城(chéng)市可(kě)持續發展的(de)思考——以上海辰山植物園爲例. 生物(wù)多(duō)樣性 09: 951~958

20. 孫哲, 範維娟, 劉桂玲, 田昌庚, 張鵬, 柳洪鵑, 楊俊, 趙豐玲, 史春餘. (2017) 幹旱脅迫下(xià)外源ABA對(duì)甘薯苗期葉片光(guāng)合特性及相關生理(lǐ)指标的(de)影(yǐng)響. 植物(wù)生理(lǐ)學報 53 (5): 873–880

21. 楊俊, 範維娟, 王紅霞, 趙姗姗, 吳銀亮, 張鵬. (2017) 番薯屬植物(wù)基因組測序最新進展. 植物(wù)生理(lǐ)學報 53 (5): 768–771

22. 吳銀亮, 王紅霞, 楊俊, 範維娟, 楊楠, 殷旻昊, 張鵬. (2017) 甘薯儲藏根形成及其調控機制研究進展. 植物(wù)生理(lǐ)學報 53 (5): 749–757

23. 趙姗姗, 楊俊. (2017) 中藥菟絲子的(de)研究現狀與展望. 植物(wù)學研究. 6 (3): 175-184.

24. Wang H, Yang J, Zhang M, Fan W, Firon N, Pattanaik S, Yuan L, Zhang P. (2016) Altered phenylpropanoid metabolism in the maize Lc-expressed sweet potato (Ipomoea batatas) affects storage root development. Scientific Reports 6: 18645.

> 研究助理(lǐ)（以姓氏拼音(yīn)爲序）